ORGANIC ACID PROFILING

Organic Acids Panel

Organic Acid Profiling — Absolute Quantification

Organic acids include TCA-cycle intermediates, short-chain dicarboxylic acids, and characteristic products of branched-chain-amino-acid and fatty-acid oxidation; their abnormal accumulation is a classic biochemical hallmark of inherited metabolic diseases (organic acidemias) and mitochondrial dysfunction. This service absolutely quantifies 60+ organic acids for energy-metabolism, mitochondrial-disease and inherited-metabolic-disease screening research.

60+
target organic acids
TARGET COMPOUNDS
3
sources: TCA / amino acids / FA oxidation
METABOLIC ORIGINS
MRM
Isotope-IS Absolute Quantification
ABSOLUTE QUANTIFICATION

Targeted List & Analysis Examples

Targeted List & Analysis Examples
Targeted List (partial)
NO.Chinese NameAbbr.English NameCAS No.
1己二酸R1Adipate124-04-9
2辛二酸R2Suberate505-48-6
3乙基丙二酸R3Ethylmalonate601-75-2
4丙酮酸R4Pyruvate127-17-3
5乳酸R5Lactate79-33-4
6β-羟基丁酸R6BHBA300-85-6
7柠檬酸R7Citrate77-92-9
8顺式乌头酸R8Cis-aconitate585-84-2
9异柠檬酸R9Isocitrate1637-73-6
10α-酮戊二酸R10AKG328-50-7
11琥珀酸R11Succinate110-15-6
12富马酸R12Fumarate110-17-8
Full list available on request — contact our team.

Technical Specifications

TECHNICAL SPECIFICATIONS
PlatformUHPLC coupled with triple-quadrupole MS (UHPLC-MS/MS)
Ion ModePositive/negative ion switching acquisition
Quantification UnitStandard-curve absolute quantification, ng/mL or ng/g
QCPooled QC samples inserted across the batch to monitor signal drift and stability

Sample Requirements

SAMPLE REQUIREMENTS
Serum / Plasma
50 μL
Tissue
30 mg
Cells
1–5 × 10⁶ cells
Feces / Gut Content
100 mg fresh / 20 mg lyophilized
Urine
50 μL
Exosomes
50 μL
Replicates: cell / microbial samples ≥6 replicates per group; animal samples ≥10 per group; clinical samples ≥50 per group with strictly controlled inclusion criteria. Sampling site, timing and handling must be consistent between experimental and control groups.
Shipping notes: applicable to serum/plasma, various tissues, feces and gut content, urine, saliva, cells / cell culture medium and more. Recommended amounts are for a single experiment — please ship 2–3× the recommended amount; keep sampling sites consistent across groups for tissue samples; ship on dry ice or cold chain.

Workflow

WORKFLOW
1
Consultation
Study goals / panel selection
2
Proposal & Quote
Targets / timeline / agreement
3
Sample Intake
Cold chain / pre-check / labeling
4
Experiment
Acquisition / QC
5
Delivery
Quantification + interpretation + raw data
Deliverables: organic-acid source classification with abnormal-accumulation flags · absolute-quantification table for each metabolite (concentration + units) · group-wise T-test and fold-change analysis · PCA / PLS-DA modeling and hierarchical clustering · KEGG annotation and pathway enrichment · full analysis report and raw data.

Analysis Examples

ANALYSIS EXAMPLES
Example figures are generated from real project data; actual figures and analyses depend on the detection panel and study plan.
T-test Bar Chart
T-test Bar Chart
All metabolites sorted by ascending p-value; grouped bars show group means ± SD with p-values annotated beside the bars.
Hierarchical Clustering Heatmap
Hierarchical Clustering Heatmap
Z-score normalized abundance patterns of all metabolites; rows ordered by hierarchical clustering — red for high, blue for low abundance.
Disease Association Bar Chart
Disease Association Bar Chart
Known metabolite–disease associations mined from HMDB and other databases, ranked by the number of associated metabolites.
Metabolite Abundance Analysis
Metabolite Abundance Analysis
Faceted boxplots of significantly different metabolites between groups; intergroup comparison by Welch's t-test.
Bar Chart Analysis
Bar Chart Analysis
Per-sample bar charts of differential metabolites, visualizing group differences and individual dispersion.

References

REFERENCES
[1] RATHOD R, GAJERA B, NAZIR K, et al. Simultaneous Measurement of Tricarboxylic Acid Cycle Intermediates in Different Biological Matrices Using Liquid Chromatography-Tandem Mass Spectrometry[J]. Metabolites, 2020, 10(3): 103.
[2] HAGEN T, KORSON M S, SAKAMOTO M, et al. A GC/MS/MS screening method for multiple organic acidemias from urine specimens[J]. Clinica Chimica Acta, 1999, 283(1-2): 77-88.

Applications

APPLICATIONS
TCA-cycle intermediate-metabolism researchGut-microbiota metabolism assessmentInherited organic-acidemia researchMitochondrial energy-metabolism analysisMetabolic-syndrome research

FAQ

FAQ
How long does a Organic Acids Panel project take?
Mature targeted panels typically take 1-3 weeks; untargeted projects take 2-4 weeks (counted from sample receipt and QC approval). The exact timeline is confirmed in writing before project start, and progress is trackable on the OmicsHub cloud platform.
What if my sample amount is below the recommendation?
Please do not dilute your samples. Low-input samples can often be accommodated by adjusting the preparation workflow — tell us the actual amount and our technical team will assess feasibility and note adjustments in the study plan.
Can I add targets to an existing panel?
Yes. Mature panels support on-demand additions; novel analytes outside the list can be implemented through custom method development (requires standards and extra validation time) — see our Custom Targeted Metabolomics service.
What samples do you need for Organic Acids Panel?
Serum/plasma ≥100 μL (fasting, no haemolysis), tissue ≥50 mg (snap-frozen), cells ≥1×10⁶ (medium washed off), urine ≥200 μL. Keep fasting time consistent, aliquot into single-use volumes and avoid freeze–thaw. Full guidance: Technical Resources → Sample Guide.

Delivery timing: sample shipping, customs declaration and similar steps may extend turnaround; actual project timelines prevail.

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